Getting Started

• Installation
  • Install with pip
  • Install with conda
  • Install from source
  • Getting notebooks and demos
  • Start the pipeline
• Command line interface
  • subcommands
  • Sub-commands
• Frequently Asked Questions
  • I don’t know Python, can I still use the pipeline?
  • Can I get a table of content for the pipeline?
  • Can I have a version of pipeline without all the notes?
  • How can I monitor the progress of some time consuming steps?
  • KilledWorker dammit, what do I do?
  • What do I do with the output of MiniAn?
• What’s New
  • v2.0.0 (2026-06-16)
  • v1.3.0 (2026-06-16)
  • v1.2.1 (2022-02-10)
  • v1.2.0 (2022-02-09)
  • v1.1.0 (2021-09-10)
  • v1.0.1 (2021-05-05)
  • v1.0.0 (2021-05-03)
  • v1.0.0rc1 (2021-04-30)
  • v1.0.0rc0 (2021-04-11)
• Contributing to MiniAn
  • Commit Messages
  • Code Style
  • Creating release
  • Packaging for PyPi
  • Packaging for conda-forge
  • Build documentation