Welcome to MiniAn Documentation!

• Getting Started
  • Installation
  • Frequently Asked Questions
  • What’s New
  • Contributing to MiniAn
• Pipeline
  • 1. Preface
  • 2. Setting Up
  • 3. Pre-processing
  • 4. Motion Correction
  • 5. Initialization
  • 6. CNMF
• Cross-registration
  • 1. Setting Up
  • 2. Allign Videos
  • 3. Cross-session registration
• Tips and Tricks
  • Understanding Performance
  • Working with MiniAn Variables
• API Reference
  • minian.cnmf module
  • minian.cross_registration module
  • minian.initialization module
  • minian.motion_correction module
  • minian.preprocessing module
  • minian.utilities module
  • minian.visualization module

Getting Started